Amirali Aghazadeh
Coda S1209
Tech Square
Atlanta, GA 30308
I am an Assistant Professor in the School of Electrical and Computer Engineering at the Georgia Institute of Technology. I serve as program faculty for the Machine Learning, Bioinformatics, and Bioengineering Ph.D. programs. I am also affiliated with the Institute for Data Engineering and Science (IDEaS) and the Parker H. Petit Institute for Bioengineering and Bioscience. Prior to Georgia Tech, I was a postdoctoral researcher at Stanford and UC Berkeley, and earned my Ph.D. at Rice University.
My research lies at the intersection of machine learning and AI, signal and information processing, and biological design and engineering. I develop principled algorithms and theoretical tools for building scalable, interpretable, and design-oriented AI systems, with a focus on understanding and engineering biological function. Current research directions are:
- Foundations of Machine Learning: Fast inference, diffusion and generative models, and high-dimensional statistical learning
- AI Safety and Interpretability: Mechanistic interpretability and reasoning, Fourier-based explanation methods
- AI for Science: Protein design, sequence-function maps, cryo-EM modeling, and computational studies of the origins of life
I pronounce my first name /æmi:r’æli:/ and last name /ægə’zɑdɛ/.
- Watch my talk on Sparsity, Epistasis, and Models of Protein Fitness Functions at Broad Institute: Models, Inference and Algorithm (MIA).
- Watch my talk on Agentic AI for Hypothesis Generation: ICLR Agentic AI Workshop.
news
| Sep 29, 2025 | Our LifeTracer work with NASA on discriminating Abiotic and Biotic organics in meteorite and terrestrial samples is now accepted to PNAS Nexus! 🎉 |
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| Sep 18, 2025 | SHAP zero has been accepted to NeurIPS! 🎉 If you are looking for an ultra-scalable algorithm to explain your ML/AL sequence models and find long-range, high-order interactions, check SHAP zero. |
| Sep 18, 2025 | SpecMER has been accepted to NeurIPS as a Spotlight! 🎉 We show that speculative decoding can be made even faster in autoregressive protein generation leveraging evolutionary information! |
| Jul 30, 2025 | We won the IDEaS GenAI for Science competition! With support from Microsoft Azure, we will develop the next generation of agentic AI tools to accelerate scientific discovery. |
| May 02, 2025 | Check out the story of our work on developing AI Scientists for hypothesis generation about Origins of Life in journal Nature. Many thanks to Celest Biever for covering this! |