publications
publications by categories in reversed chronological order. for a more complete list check my google scholar
2023
- Efficiently Computing Sparse Fourier Transforms of q -ary FunctionsarXiv:2301.06200 2023
2022
- Current progress and open challenges for applying deep learning across the biosciencesNature Communications 2022
- On the sparsity of fitness functions and implications for learningProceedings of the National Academy of Sciences (PNAS) 2022
- BEAR: Sketching BFGS Algorithm for Ultra-High Dimensional Feature Selection in Sublinear MemoryIn Mathematical and Scientific Machine Learning (MSML) 2022
- Spectral Regularization Allows Data-frugal Learning over Combinatorial SpacesarXiv:2210.02604 2022
2021
- Epistatic Net allows the sparse spectral regularization of deep neural networks for inferring fitness functionsNature Communications 2021
- Group-Structured Adversarial TrainingarXiv:2106.10324 2021
- Anomalous nanoparticle surface diffusion in LCTEM is revealed by deep learning-assisted analysisProceedings of the National Academy of Sciences 2021
2020
- CRISPRLand: Interpretable large-scale inference of DNA repair landscape based on a spectral approachBioinformatics 2020
2019
- Large dataset enables prediction of repair after CRISPR–Cas9 editing in primary T cellsNature Biotechnology 2019
- Data-driven semi-supervised and supervised learning algorithms for health monitoring of pipesMechanical Systems and Signal Processing 2019
- Sparsity-based approaches for damage detection in platesMechanical Systems and Signal Processing 2019
2018
- MISSION: Ultra large-scale feature selection using Count SketchesIn International Conference on Machine Learning (ICML) 2018
- Insense: Incoherent sensor selection for sparse signalsSignal Processing 2018
2017
- Rhash: Robust hashing via l∞-norm distortionIn International Joint Conference on Artificial Intelligence (IJCAI) 2017
- Machine Learning in Large-scale Genomics: Sensing, Processing, and Analysis2017
2016
- Universal microbial diagnostics using random DNA probesScience Advances 2016
2013
- Adaptive step size selection for optimization via the ski rental problemIn International Conference on Acoustics, Speech and Signal Processing (ICASSP) 2013